IL_6H58_120

3D structure

PDB id

6H58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

7.9 Å

Loop

Sequence

UAG*CAAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6H58_120 not in the Motif Atlas

Geometric match to IL_5J7L_254

Geometric discrepancy: 0.1297

The information below is about IL_5J7L_254

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69440.3

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

3

Unit IDs

6H58|1|AA|U|293
6H58|1|AA|A|294
6H58|1|AA|G|295
*
6H58|1|AA|C|343
6H58|1|AA|A|344
6H58|1|AA|A|345
6H58|1|AA|A|346
6H58|1|AA|A|347

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain UU

50S ribosomal protein L24