IL_6H58_157

3D structure

PDB id

6H58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

7.9 Å

Loop

Sequence

CCAAC*GGG

Length

8 nucleotides

Bulged bases

6H58|1|AA|G|1332

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6H58_157 not in the Motif Atlas

Geometric match to IL_5J7L_291

Geometric discrepancy: 0.1439

The information below is about IL_5J7L_291

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.11

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

19

Unit IDs

6H58|1|AA|C|1319
6H58|1|AA|C|1320
6H58|1|AA|A|1321
6H58|1|AA|A|1322
6H58|1|AA|C|1323
*
6H58|1|AA|G|1331
6H58|1|AA|G|1332
6H58|1|AA|G|1333

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain SS

50S ribosomal protein L22

Chain TT

50S ribosomal protein L23