IL_6H58_334
3D structure
- PDB id
- 6H58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.9 Å
Loop
- Sequence
- GGAGUACG*UAAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6H58_334 not in the Motif Atlas
- Homologous match to IL_5J7L_038
- Geometric discrepancy: 0.0815
- The information below is about IL_5J7L_038
- Detailed Annotation
- 8x6 Sarcin-Ricin with inserted Y; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_41756.4
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
6H58|1|aa|G|887
6H58|1|aa|G|888
6H58|1|aa|A|889
6H58|1|aa|G|890
6H58|1|aa|U|891
6H58|1|aa|A|892
6H58|1|aa|C|893
6H58|1|aa|G|894
*
6H58|1|aa|U|905
6H58|1|aa|A|906
6H58|1|aa|A|907
6H58|1|aa|A|908
6H58|1|aa|A|909
6H58|1|aa|C|910
Current chains
- Chain aa
- 16S ribosomal RNA
Nearby chains
- Chain AA
- Large subunit ribosomal RNA; LSU rRNA
- Chain ll
- 30S ribosomal protein S12
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