IL_6H58_374
3D structure
- PDB id
- 6H58 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.9 Å
Loop
- Sequence
- AGAAU*GGAAU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6H58_374 not in the Motif Atlas
- Homologous match to IL_4LFB_065
- Geometric discrepancy: 0.0842
- The information below is about IL_4LFB_065
- Detailed Annotation
- Triple non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.2
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
6H58|1|aa|A|673
6H58|1|aa|G|674
6H58|1|aa|A|675
6H58|1|aa|A|676
6H58|1|aa|U|677
*
6H58|1|aa|G|713
6H58|1|aa|G|714
6H58|1|aa|A|715
6H58|1|aa|A|716
6H58|1|aa|U|717
Current chains
- Chain aa
- 16S ribosomal RNA
Nearby chains
- Chain CC
- 50S ribosomal protein L2
- Chain ff
- 30S ribosomal protein S6
- Chain kk
- 30S ribosomal protein S11
- Chain rr
- 30S ribosomal protein S18
- Chain uu
- 30S ribosomal protein S21
Coloring options: