IL_6HA1_100
3D structure
- PDB id
- 6HA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUGAG*CAAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- 6HA1|1|A|G|2809
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HA1_100 not in the Motif Atlas
- Homologous match to IL_7RQB_102
- Geometric discrepancy: 0.1041
- The information below is about IL_7RQB_102
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.1
- Basepair signature
- cWW-tSH-tHW-tHS-cSH-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
6HA1|1|A|U|2665
6HA1|1|A|U|2666
6HA1|1|A|G|2667
6HA1|1|A|A|2668
6HA1|1|A|G|2669
*
6HA1|1|A|C|2803
6HA1|1|A|A|2804
6HA1|1|A|A|2805
6HA1|1|A|G|2806
6HA1|1|A|A|2807
6HA1|1|A|U|2808
6HA1|1|A|G|2809
6HA1|1|A|A|2810
6HA1|1|A|G|2811
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain J
- 50S ribosomal protein L13
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