IL_6HA1_105
3D structure
- PDB id
- 6HA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAUAAG*UGAAGC
- Length
- 12 nucleotides
- Bulged bases
- 6HA1|1|A|A|2794
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HA1_105 not in the Motif Atlas
- Homologous match to IL_4WF9_104
- Geometric discrepancy: 0.0884
- The information below is about IL_4WF9_104
- Detailed Annotation
- UAA/GAN with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_91079.1
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
6HA1|1|A|G|2766
6HA1|1|A|A|2767
6HA1|1|A|U|2768
6HA1|1|A|A|2769
6HA1|1|A|A|2770
6HA1|1|A|G|2771
*
6HA1|1|A|U|2791
6HA1|1|A|G|2792
6HA1|1|A|A|2793
6HA1|1|A|A|2794
6HA1|1|A|G|2795
6HA1|1|A|C|2796
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain G
- 50S ribosomal protein L6
- Chain J
- 50S ribosomal protein L13
Coloring options: