IL_6HA1_145
3D structure
- PDB id
- 6HA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AAGAG*UGGU
- Length
- 9 nucleotides
- Bulged bases
- 6HA1|1|a|A|674
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HA1_145 not in the Motif Atlas
- Homologous match to IL_5J7L_033
- Geometric discrepancy: 0.107
- The information below is about IL_5J7L_033
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
6HA1|1|a|A|671
6HA1|1|a|A|672
6HA1|1|a|G|673
6HA1|1|a|A|674
6HA1|1|a|G|675
*
6HA1|1|a|U|749
6HA1|1|a|G|750
6HA1|1|a|G|751
6HA1|1|a|U|752
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain f
- 30S ribosomal protein S6
- Chain o
- 30S ribosomal protein S15
- Chain r
- 30S ribosomal protein S18
Coloring options: