IL_6HA1_165
3D structure
- PDB id
- 6HA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AACAAAG*CACAAAU
- Length
- 14 nucleotides
- Bulged bases
- 6HA1|1|a|C|1295
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HA1_165 not in the Motif Atlas
- Homologous match to IL_5J7L_054
- Geometric discrepancy: 0.2183
- The information below is about IL_5J7L_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09129.2
- Basepair signature
- cWW-L-R-tWH-L-R-L-tWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
6HA1|1|a|A|1256
6HA1|1|a|A|1257
6HA1|1|a|C|1258
6HA1|1|a|A|1259
6HA1|1|a|A|1260
6HA1|1|a|A|1261
6HA1|1|a|G|1262
*
6HA1|1|a|C|1293
6HA1|1|a|A|1294
6HA1|1|a|C|1295
6HA1|1|a|A|1296
6HA1|1|a|A|1297
6HA1|1|a|A|1298
6HA1|1|a|U|1299
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain g
- 30S ribosomal protein S7
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14
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