IL_6HCJ_103
3D structure
- PDB id
- 6HCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GACCU*AGC
- Length
- 8 nucleotides
- Bulged bases
- 6HCJ|1|51|C|4349
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HCJ_103 not in the Motif Atlas
- Geometric match to IL_8C3A_419
- Geometric discrepancy: 0.3778
- The information below is about IL_8C3A_419
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47767.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
6HCJ|1|51|G|4347
6HCJ|1|51|A|4348
6HCJ|1|51|C|4349
6HCJ|1|51|C|4350
6HCJ|1|51|U|4351
*
6HCJ|1|51|A|4363
6HCJ|1|51|G|4364
6HCJ|1|51|C|4365
Current chains
- Chain 51
- 28S ribosomal RNA
Nearby chains
- Chain L3
- eL13
- Chain Q3
- eL18
- Chain a3
- uL15
- Chain o3
- eL42
Coloring options: