IL_6HCM_049
3D structure
- PDB id
- 6HCM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (stalled monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.8 Å
Loop
- Sequence
- GGG*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 6HCM|1|52|G|1625, 6HCM|1|52|A|1637, 6HCM|1|52|A|1638, 6HCM|1|52|U|1639
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HCM_049 not in the Motif Atlas
- Homologous match to IL_8C3A_036
- Geometric discrepancy: 0.2824
- The information below is about IL_8C3A_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
6HCM|1|52|G|1624
6HCM|1|52|G|1625
6HCM|1|52|G|1626
*
6HCM|1|52|U|1636
6HCM|1|52|A|1637
6HCM|1|52|A|1638
6HCM|1|52|U|1639
6HCM|1|52|C|1640
Current chains
- Chain 52
- 28S ribosomal RNA
Nearby chains
- Chain 1
- nascent chain
- Chain A3
- Ribosomal protein L8
- Chain N3
- Ribosomal protein L15
- Chain P3
- uL22
- Chain j3
- Ribosomal protein L37
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