IL_6HCM_213
3D structure
- PDB id
- 6HCM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (stalled monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.8 Å
Loop
- Sequence
- CCG*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 6HCM|1|A1|C|1701, 6HCM|1|A1|A|1835
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HCM_213 not in the Motif Atlas
- Geometric match to IL_4V88_463
- Geometric discrepancy: 0.2794
- The information below is about IL_4V88_463
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61438.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
6HCM|1|A1|C|1700
6HCM|1|A1|C|1701
6HCM|1|A1|G|1702
*
6HCM|1|A1|C|1833
6HCM|1|A1|A|1834
6HCM|1|A1|A|1835
6HCM|1|A1|G|1836
Current chains
- Chain A1
- 18S ribosomal RNA
Nearby chains
- Chain 23
- Transfer RNA; tRNA
- Chain b1
- eS26
- Chain j1
- eRF1(AAQ)
- Chain n3
- eL41
- Chain w3
- mRNA
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