IL_6HCQ_050
3D structure
- PDB id
- 6HCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the rabbit collided di-ribosome (collided monosome)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.5 Å
Loop
- Sequence
- GGG*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 6HCQ|1|51|G|1625, 6HCQ|1|51|A|1637, 6HCQ|1|51|A|1638
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HCQ_050 not in the Motif Atlas
- Geometric match to IL_5J7L_265
- Geometric discrepancy: 0.2557
- The information below is about IL_5J7L_265
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
6HCQ|1|51|G|1624
6HCQ|1|51|G|1625
6HCQ|1|51|G|1626
*
6HCQ|1|51|U|1636
6HCQ|1|51|A|1637
6HCQ|1|51|A|1638
6HCQ|1|51|U|1639
6HCQ|1|51|C|1640
Current chains
- Chain 51
- 28S ribosomal RNA
Nearby chains
- Chain 1
- nascent chain
- Chain A3
- Ribosomal protein L8
- Chain N3
- Ribosomal protein L15
- Chain P3
- uL22
- Chain j3
- Ribosomal protein L37
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