IL_6HCQ_205

3D structure

PDB id

6HCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit collided di-ribosome (collided monosome)

Experimental method

ELECTRON MICROSCOPY

Resolution

6.5 Å

Loop

Sequence

CCC*GGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6HCQ_205 not in the Motif Atlas

Geometric match to IL_5TBW_064

Geometric discrepancy: 0.3772

The information below is about IL_5TBW_064

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_15698.1

Basepair signature

cWW-tSH-cSH-cWW

Number of instances in this motif group

9

Unit IDs

6HCQ|1|A2|C|1751
6HCQ|1|A2|C|1752
6HCQ|1|A2|C|1753
*
6HCQ|1|A2|G|1779
6HCQ|1|A2|G|1780
6HCQ|1|A2|A|1781
6HCQ|1|A2|G|1782

Current chains

Chain A2

18S ribosomal RNA

Nearby chains