IL_6HHQ_273
3D structure
- PDB id
- 6HHQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of compound C45 bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GUUCCG*UGAC
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HHQ_273 not in the Motif Atlas
- Homologous match to IL_5TBW_043
- Geometric discrepancy: 0.1839
- The information below is about IL_5TBW_043
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_71110.1
- Basepair signature
- cWW-cWW-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
6HHQ|1|AR|G|1013
6HHQ|1|AR|U|1014
6HHQ|1|AR|U|1015
6HHQ|1|AR|C|1016
6HHQ|1|AR|C|1017
6HHQ|1|AR|G|1018
*
6HHQ|1|AR|U|1034
6HHQ|1|AR|G|1035
6HHQ|1|AR|A|1036
6HHQ|1|AR|C|1037
Current chains
- Chain AR
- 25S ribosomal RNA
Nearby chains
- Chain CG
- 60S ribosomal protein L5
- Chain CL
- 60S ribosomal protein L10
- Chain CM
- 60S ribosomal protein L11-B
- Chain sM
- Suppressor protein STM1
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