IL_6HRM_045
3D structure
- PDB id
- 6HRM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S d2d8 stapled ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- GG*UCAUC
- Length
- 7 nucleotides
- Bulged bases
- 6HRM|1|1|C|1200, 6HRM|1|1|A|1201
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HRM_045 not in the Motif Atlas
- Homologous match to IL_5J7L_048
- Geometric discrepancy: 0.1187
- The information below is about IL_5J7L_048
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_95583.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
6HRM|1|1|G|1057
6HRM|1|1|G|1058
*
6HRM|1|1|U|1199
6HRM|1|1|C|1200
6HRM|1|1|A|1201
6HRM|1|1|U|1202
6HRM|1|1|C|1203
Current chains
- Chain 1
- stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA
Nearby chains
- Chain h
- 30S ribosomal protein S3
- Chain o
- 30S ribosomal protein S10
- Chain s
- 30S ribosomal protein S14
Coloring options: