IL_6HRM_073
3D structure
- PDB id
- 6HRM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S d2d8 stapled ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- CCAGUAG*CGAACG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HRM_073 not in the Motif Atlas
- Geometric match to IL_5J7L_251
- Geometric discrepancy: 0.0765
- The information below is about IL_5J7L_251
- Detailed Annotation
- 7x6 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_26307.2
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 9
Unit IDs
6HRM|1|1|C|1745
6HRM|1|1|C|1746
6HRM|1|1|A|1747
6HRM|1|1|G|1748
6HRM|1|1|U|1749
6HRM|1|1|A|1750
6HRM|1|1|G|1751
*
6HRM|1|1|C|1759
6HRM|1|1|G|1760
6HRM|1|1|A|1761
6HRM|1|1|A|1762
6HRM|1|1|C|1763
6HRM|1|1|G|1764
Current chains
- Chain 1
- stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA
Nearby chains
- Chain L
- 50S ribosomal protein L15
- Chain e
- 50S ribosomal protein L35
Coloring options: