IL_6HRM_112
3D structure
- PDB id
- 6HRM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S d2d8 stapled ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.96 Å
Loop
- Sequence
- CUAAG*CGAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HRM_112 not in the Motif Atlas
- Geometric match to IL_5J7L_292
- Geometric discrepancy: 0.0709
- The information below is about IL_5J7L_292
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- UAA/GAN
- Motif group
- IL_89021.2
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
6HRM|1|1|C|2857
6HRM|1|1|U|2858
6HRM|1|1|A|2859
6HRM|1|1|A|2860
6HRM|1|1|G|2861
*
6HRM|1|1|C|2882
6HRM|1|1|G|2883
6HRM|1|1|A|2884
6HRM|1|1|U|2885
6HRM|1|1|G|2886
Current chains
- Chain 1
- stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA
Nearby chains
- Chain B
- 50S ribosomal protein L2
- Chain d
- 50S ribosomal protein L34
Coloring options: