IL_6HTQ_021

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CCCAC*GGGG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6HTQ_021 not in the Motif Atlas

Geometric match to IL_8C3A_111

Geometric discrepancy: 0.3983

The information below is about IL_8C3A_111

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_50458.1

Basepair signature

cWW-cWW-L-R-L-cWW

Number of instances in this motif group

5

Unit IDs

6HTQ|1|A|C|783
6HTQ|1|A|C|784
6HTQ|1|A|C|785
6HTQ|1|A|A|786
6HTQ|1|A|C|787
*
6HTQ|1|A|G|804
6HTQ|1|A|G|805
6HTQ|1|A|G|806
6HTQ|1|A|G|807

Current chains

Chain A

23S ribosomal RNA

Nearby chains