IL_6HTQ_023

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

GUAAG*UAUC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6HTQ_023 not in the Motif Atlas

Homologous match to IL_4WF9_029

Geometric discrepancy: 0.3347

The information below is about IL_4WF9_029

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_01742.1

Basepair signature

cWW-L-cWW-R-cWW

Number of instances in this motif group

3

Unit IDs

6HTQ|1|A|G|891
6HTQ|1|A|U|892
6HTQ|1|A|A|893
6HTQ|1|A|A|894
6HTQ|1|A|G|895
*
6HTQ|1|A|U|977
6HTQ|1|A|A|978
6HTQ|1|A|U|979
6HTQ|1|A|C|980

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain Y

50S ribosomal protein L30