IL_6HTQ_024

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CUU*AAUG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6HTQ_024 not in the Motif Atlas

Geometric match to IL_4N0T_004

Geometric discrepancy: 0.2122

The information below is about IL_4N0T_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_32983.2

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

8

Unit IDs

6HTQ|1|A|C|899
6HTQ|1|A|U|900
6HTQ|1|A|U|901
*
6HTQ|1|A|A|970
6HTQ|1|A|A|971
6HTQ|1|A|U|972
6HTQ|1|A|G|973

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain V

50S ribosomal protein L27

Chain Y

50S ribosomal protein L30