IL_6HTQ_041
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- CUGUGAAGC*GUGGAG
- Length
- 15 nucleotides
- Bulged bases
- 6HTQ|1|A|U|1251
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HTQ_041 not in the Motif Atlas
- Geometric match to IL_4LFB_031
- Geometric discrepancy: 0.3755
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
6HTQ|1|A|C|1248
6HTQ|1|A|U|1249
6HTQ|1|A|G|1250
6HTQ|1|A|U|1251
6HTQ|1|A|G|1252
6HTQ|1|A|A|1253
6HTQ|1|A|A|1254
6HTQ|1|A|G|1255
6HTQ|1|A|C|1256
*
6HTQ|1|A|G|1273
6HTQ|1|A|U|1274
6HTQ|1|A|G|1275
6HTQ|1|A|G|1276
6HTQ|1|A|A|1277
6HTQ|1|A|G|1278
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain Q
- 50S ribosomal protein L20
Coloring options: