IL_6HTQ_056

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CGAG*CGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6HTQ_056 not in the Motif Atlas

Geometric match to IL_5J7L_303

Geometric discrepancy: 0.1577

The information below is about IL_5J7L_303

Detailed Annotation

UAA/GAN variation

Broad Annotation

UAA/GAN variation

Motif group

IL_23774.1

Basepair signature

cWW-L-R-L-tHS-cWW

Number of instances in this motif group

11

Unit IDs

6HTQ|1|A|C|1573
6HTQ|1|A|G|1574
6HTQ|1|A|A|1575
6HTQ|1|A|G|1576
*
6HTQ|1|A|C|1590
6HTQ|1|A|G|1591
6HTQ|1|A|A|1592
6HTQ|1|A|A|1593
6HTQ|1|A|G|1594

Current chains

Chain A

23S ribosomal RNA

Nearby chains