IL_6HTQ_089
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- UUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HTQ_089 not in the Motif Atlas
- Homologous match to IL_7RQB_103
- Geometric discrepancy: 0.2384
- The information below is about IL_7RQB_103
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.1
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 7
Unit IDs
6HTQ|1|A|U|2681
6HTQ|1|A|U|2682
6HTQ|1|A|A|2683
6HTQ|1|A|G|2684
6HTQ|1|A|U|2685
6HTQ|1|A|A|2686
6HTQ|1|A|C|2687
*
6HTQ|1|A|G|2692
6HTQ|1|A|G|2693
6HTQ|1|A|A|2694
6HTQ|1|A|C|2695
6HTQ|1|A|C|2696
6HTQ|1|A|G|2697
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain G
- 50S ribosomal protein L6
- Chain u
- Transfer RNA; tRNA
- Chain x
- GTP pyrophosphokinase
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