IL_6HTQ_135
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- GUGUAG*CGUAGAGAU
- Length
- 15 nucleotides
- Bulged bases
- 6HTQ|1|a|A|711
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HTQ_135 not in the Motif Atlas
- Geometric match to IL_4LFB_031
- Geometric discrepancy: 0.1369
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
6HTQ|1|a|G|692
6HTQ|1|a|U|693
6HTQ|1|a|G|694
6HTQ|1|a|U|695
6HTQ|1|a|A|696
6HTQ|1|a|G|697
*
6HTQ|1|a|C|708
6HTQ|1|a|G|709
6HTQ|1|a|U|710
6HTQ|1|a|A|711
6HTQ|1|a|G|712
6HTQ|1|a|A|713
6HTQ|1|a|G|714
6HTQ|1|a|A|715
6HTQ|1|a|U|716
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain k
- 30S ribosomal protein S11
Coloring options: