IL_6HTQ_148
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- UUG*CAAA
- Length
- 7 nucleotides
- Bulged bases
- 6HTQ|1|a|A|1205
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HTQ_148 not in the Motif Atlas
- Geometric match to IL_4E5C_001
- Geometric discrepancy: 0.2299
- The information below is about IL_4E5C_001
- Detailed Annotation
- Isolated cWH basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_10892.2
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 58
Unit IDs
6HTQ|1|a|U|1069
6HTQ|1|a|U|1070
6HTQ|1|a|G|1071
*
6HTQ|1|a|C|1204
6HTQ|1|a|A|1205
6HTQ|1|a|A|1206
6HTQ|1|a|A|1207
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain e
- 30S ribosomal protein S5
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14
- Chain u
- Transfer RNA; tRNA
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