IL_6HTQ_170
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- ACGGGACGAACACCGAUAUGC*GAUUU
- Length
- 26 nucleotides
- Bulged bases
- 6HTQ|1|A|G|63, 6HTQ|1|A|U|72, 6HTQ|1|A|G|75
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HTQ_170 not in the Motif Atlas
- Geometric match to IL_5TBW_144
- Geometric discrepancy: 0.3055
- The information below is about IL_5TBW_144
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44998.1
- Basepair signature
- cWW-cWW-R-cWW-tSS-R-cWW-cWW-L-cWW-L-L-L-cWW-L-cSS-L-R-L-R
- Number of instances in this motif group
- 2
Unit IDs
6HTQ|1|A|A|56
6HTQ|1|A|C|57
6HTQ|1|A|G|58
6HTQ|1|A|G|59
6HTQ|1|A|G|60
6HTQ|1|A|A|61
6HTQ|1|A|C|62
6HTQ|1|A|G|63
6HTQ|1|A|A|64
6HTQ|1|A|A|65
6HTQ|1|A|C|66
6HTQ|1|A|A|67
6HTQ|1|A|C|68
6HTQ|1|A|C|69
6HTQ|1|A|G|70
6HTQ|1|A|A|71
6HTQ|1|A|U|72
6HTQ|1|A|A|73
6HTQ|1|A|U|74
6HTQ|1|A|G|75
6HTQ|1|A|C|76
*
6HTQ|1|A|G|109
6HTQ|1|A|A|110
6HTQ|1|A|U|111
6HTQ|1|A|U|112
6HTQ|1|A|U|113
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 3
- 50S ribosomal protein L34
- Chain T
- 50S ribosomal protein L23
- Chain X
- 50S ribosomal protein L29
Coloring options: