IL_6HTQ_189
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- UGCUG*CAGUAAA
- Length
- 12 nucleotides
- Bulged bases
- 6HTQ|1|A|A|1928, 6HTQ|1|A|A|1929
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HTQ_189 not in the Motif Atlas
- Geometric match to IL_7VYX_008
- Geometric discrepancy: 0.3257
- The information below is about IL_7VYX_008
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_71154.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 17
Unit IDs
6HTQ|1|A|U|1870
6HTQ|1|A|G|1871
6HTQ|1|A|C|1872
6HTQ|1|A|U|1873
6HTQ|1|A|G|1874
*
6HTQ|1|A|C|1924
6HTQ|1|A|A|1925
6HTQ|1|A|G|1926
6HTQ|1|A|U|1927
6HTQ|1|A|A|1928
6HTQ|1|A|A|1929
6HTQ|1|A|A|1930
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: