IL_6HTQ_208
3D structure
- PDB id
- 6HTQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- GAAGAG*UGGUC
- Length
- 11 nucleotides
- Bulged bases
- 6HTQ|1|a|A|674
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6HTQ_208 not in the Motif Atlas
- Geometric match to IL_8D29_010
- Geometric discrepancy: 0.3907
- The information below is about IL_8D29_010
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_71154.3
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 17
Unit IDs
6HTQ|1|a|G|670
6HTQ|1|a|A|671
6HTQ|1|a|A|672
6HTQ|1|a|G|673
6HTQ|1|a|A|674
6HTQ|1|a|G|675
*
6HTQ|1|a|U|749
6HTQ|1|a|G|750
6HTQ|1|a|G|751
6HTQ|1|a|U|752
6HTQ|1|a|C|753
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain f
- 30S ribosomal protein S6
- Chain o
- 30S ribosomal protein S15
- Chain r
- 30S ribosomal protein S18
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