IL_6HTQ_236

3D structure

PDB id

6HTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stringent response control by a bifunctional RelA enzyme in the presence and absence of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

UAGU*AG

Length

6 nucleotides

Bulged bases

6HTQ|1|a|A|258, 6HTQ|1|a|G|259

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6HTQ_236 not in the Motif Atlas

Homologous match to IL_5J7L_015

Geometric discrepancy: 0.3704

The information below is about IL_5J7L_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47074.2

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

4

Unit IDs

6HTQ|1|a|U|257
6HTQ|1|a|A|258
6HTQ|1|a|G|259
6HTQ|1|a|U|260
*
6HTQ|1|a|A|282
6HTQ|1|a|G|283

Current chains

Chain a

16S rRNA

Nearby chains

Chain q

30S ribosomal protein S17