IL_6I7O_464
3D structure
- PDB id
- 6I7O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- UAA*UCGA
- Length
- 7 nucleotides
- Bulged bases
- 6I7O|1|YS|G|95
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6I7O_464 not in the Motif Atlas
- Geometric match to IL_5TBW_145
- Geometric discrepancy: 0.1693
- The information below is about IL_5TBW_145
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_54650.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
6I7O|1|YS|U|64
6I7O|1|YS|A|65
6I7O|1|YS|A|66
*
6I7O|1|YS|U|93
6I7O|1|YS|C|94
6I7O|1|YS|G|95
6I7O|1|YS|A|96
Current chains
- Chain YS
- 5.8S ribosomal RNA
Nearby chains
- Chain XF
- 60S ribosomal protein L37-A
- Chain XK
- 60S ribosomal protein L26-A
- Chain YP
- 60S ribosomal protein L35-A
- Chain YQ
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: