IL_6I7V_160

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GAUG*CGC

Length

7 nucleotides

Bulged bases

6I7V|1|CA|U|1033

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_160 not in the Motif Atlas

Homologous match to IL_5J7L_282

Geometric discrepancy: 0.1697

The information below is about IL_5J7L_282

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_57744.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

22

Unit IDs

6I7V|1|CA|G|1031
6I7V|1|CA|A|1032
6I7V|1|CA|U|1033
6I7V|1|CA|G|1034
*
6I7V|1|CA|C|1121
6I7V|1|CA|G|1122
6I7V|1|CA|C|1123

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain C5

50S ribosomal protein L36 2

Chain CB

5S ribosomal RNA; 5S rRNA

Chain CN

50S ribosomal protein L16