IL_6I7V_218

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUGAG*CGAGAUGAG

Length

14 nucleotides

Bulged bases

6I7V|1|CA|G|2780

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_218 not in the Motif Atlas

Homologous match to IL_5J7L_345

Geometric discrepancy: 0.1381

The information below is about IL_5J7L_345

Detailed Annotation

tSH-tHS-tHW

Broad Annotation

tSH-tHS-tHW

Motif group

IL_04638.3

Basepair signature

cWW-tSH-tHW-tHS-cSH-cWW-L

Number of instances in this motif group

5

Unit IDs

6I7V|1|CA|C|2636
6I7V|1|CA|U|2637
6I7V|1|CA|G|2638
6I7V|1|CA|A|2639
6I7V|1|CA|G|2640
*
6I7V|1|CA|C|2774
6I7V|1|CA|G|2775
6I7V|1|CA|A|2776
6I7V|1|CA|G|2777
6I7V|1|CA|A|2778
6I7V|1|CA|U|2779
6I7V|1|CA|G|2780
6I7V|1|CA|A|2781
6I7V|1|CA|G|2782

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain CD

50S ribosomal protein L3

Chain CK

50S ribosomal protein L13