3D structure

PDB id
6I7V (explore in PDB, NAKB, or RNA 3D Hub)
Description
Ribosomal protein paralogs bL31 and bL36
Experimental method
X-RAY DIFFRACTION
Resolution
2.9 Å

Loop

Sequence
CUAAG*CGAAG
Length
10 nucleotides
Bulged bases
6I7V|1|DA|A|1156
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6I7V_265 not in the Motif Atlas
Homologous match to IL_4WF9_036
Geometric discrepancy: 0.095
The information below is about IL_4WF9_036
Detailed Annotation
UAA/GAN
Broad Annotation
No text annotation
Motif group
IL_08938.1
Basepair signature
cWW-tWH-L-tHS-cWW
Number of instances in this motif group
22

Unit IDs

6I7V|1|DA|C|998
6I7V|1|DA|U|999
6I7V|1|DA|A|1000
6I7V|1|DA|A|1001
6I7V|1|DA|G|1002
*
6I7V|1|DA|C|1153
6I7V|1|DA|G|1154
6I7V|1|DA|A|1155
6I7V|1|DA|A|1156
6I7V|1|DA|G|1157

Current chains

Chain DA
23S ribosomal RNA

Nearby chains

Chain D0
50S ribosomal protein L30
Chain DB
5S ribosomal RNA; 5S rRNA
Chain DR
50S ribosomal protein L20
Chain DS
50S ribosomal protein L21

Coloring options:


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