3D structure

PDB id
6I7V (explore in PDB, NAKB, or RNA 3D Hub)
Description
Ribosomal protein paralogs bL31 and bL36
Experimental method
X-RAY DIFFRACTION
Resolution
2.9 Å

Loop

Sequence
CUGAG*CGAGAUGAG
Length
14 nucleotides
Bulged bases
6I7V|1|DA|G|2780
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6I7V_330 not in the Motif Atlas
Homologous match to IL_5J7L_345
Geometric discrepancy: 0.0663
The information below is about IL_5J7L_345
Detailed Annotation
tSH-tHS-tHW
Broad Annotation
tSH-tHS-tHW
Motif group
IL_04638.3
Basepair signature
cWW-tSH-tHW-tHS-cSH-cWW-L
Number of instances in this motif group
5

Unit IDs

6I7V|1|DA|C|2636
6I7V|1|DA|U|2637
6I7V|1|DA|G|2638
6I7V|1|DA|A|2639
6I7V|1|DA|G|2640
*
6I7V|1|DA|C|2774
6I7V|1|DA|G|2775
6I7V|1|DA|A|2776
6I7V|1|DA|G|2777
6I7V|1|DA|A|2778
6I7V|1|DA|U|2779
6I7V|1|DA|G|2780
6I7V|1|DA|A|2781
6I7V|1|DA|G|2782

Current chains

Chain DA
23S ribosomal RNA

Nearby chains

Chain DD
50S ribosomal protein L3
Chain DK
50S ribosomal protein L13

Coloring options:


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