IL_6I7V_378

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGUU*AAGUG

Length

9 nucleotides

Bulged bases

6I7V|1|CA|G|1248

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6I7V_378 not in the Motif Atlas

Geometric match to IL_1GID_008

Geometric discrepancy: 0.377

The information below is about IL_1GID_008

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

36

Unit IDs

6I7V|1|CA|C|1196
6I7V|1|CA|G|1197
6I7V|1|CA|U|1198
6I7V|1|CA|U|1199
*
6I7V|1|CA|A|1246
6I7V|1|CA|A|1247
6I7V|1|CA|G|1248
6I7V|1|CA|U|1249
6I7V|1|CA|G|1250

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain CE

50S ribosomal protein L4

Chain CM

50S ribosomal protein L15

Chain CR

50S ribosomal protein L20