IL_6LKQ_076
3D structure
- PDB id
- 6LKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UUAAC*GGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6LKQ_076 not in the Motif Atlas
- Homologous match to IL_5J7L_258
- Geometric discrepancy: 0.0843
- The information below is about IL_5J7L_258
- Detailed Annotation
- AAA cross-strand stack
- Broad Annotation
- AAA cross-strand stack
- Motif group
- IL_66798.2
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
6LKQ|1|t|U|606
6LKQ|1|t|U|607
6LKQ|1|t|A|608
6LKQ|1|t|A|609
6LKQ|1|t|C|610
*
6LKQ|1|t|G|618
6LKQ|1|t|G|619
6LKQ|1|t|G|620
6LKQ|1|t|A|621
6LKQ|1|t|G|622
Current chains
- Chain t
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L15
- Chain W
- 50S ribosomal protein L4
Coloring options: