IL_6LU8_077
3D structure
- PDB id
- 6LU8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a human pre-60S ribosomal subunit - state A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- CGC*GGUG
- Length
- 7 nucleotides
- Bulged bases
- 6LU8|1|2|G|2343
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6LU8_077 not in the Motif Atlas
- Homologous match to IL_5TBW_057
- Geometric discrepancy: 0.0775
- The information below is about IL_5TBW_057
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- Isolated cWS basepair
- Motif group
- IL_73554.3
- Basepair signature
- cWW-cWS-cWW
- Number of instances in this motif group
- 10
Unit IDs
6LU8|1|2|C|2290
6LU8|1|2|G|2291
6LU8|1|2|C|2292
*
6LU8|1|2|G|2342
6LU8|1|2|G|2343
6LU8|1|2|U|2344
6LU8|1|2|G|2345
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain D
- 60S ribosomal protein L4
- Chain L
- 60S ribosomal protein L27a
- Chain k
- 60S ribosomal protein L32
- Chain l
- 60S ribosomal protein L28
Coloring options: