IL_6MTC_064
3D structure
- PDB id
- 6MTC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CCGGUAA*UAAAU(E7G)G
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: E7G
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6MTC_064 not in the Motif Atlas
- Geometric match to IL_8C3A_041
- Geometric discrepancy: 0.1436
- The information below is about IL_8C3A_041
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93830.3
- Basepair signature
- cWW-cWW-L-R-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
6MTC|1|5|C|1731
6MTC|1|5|C|1732
6MTC|1|5|G|1733
6MTC|1|5|G|1734
6MTC|1|5|U|1735
6MTC|1|5|A|1736
6MTC|1|5|A|1737
*
6MTC|1|5|U|1792
6MTC|1|5|A|1793
6MTC|1|5|A|1794
6MTC|1|5|A|1795
6MTC|1|5|U|1796
6MTC|1|5|E7G|1797
6MTC|1|5|G|1798
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 7
- 5S ribosomal RNA; 5S rRNA
- Chain D
- 60S ribosomal protein L5
- Chain F
- 60S ribosomal protein L7
- Chain I
- 60S ribosomal protein L10
- Chain T
- 60S ribosomal protein L21
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