IL_6MTE_206
3D structure
- PDB id
- 6MTE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- G(PSU)GCCAG*CGGUAAUUC
- Length
- 16 nucleotides
- Bulged bases
- 6MTE|1|9|A|628, 6MTE|1|9|U|630, 6MTE|1|9|U|631
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6MTE_206 not in the Motif Atlas
- Homologous match to IL_4V88_415
- Geometric discrepancy: 0.2135
- The information below is about IL_4V88_415
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
6MTE|1|9|G|611
6MTE|1|9|PSU|612
6MTE|1|9|G|613
6MTE|1|9|C|614
6MTE|1|9|C|615
6MTE|1|9|A|616
6MTE|1|9|G|617
*
6MTE|1|9|C|624
6MTE|1|9|G|625
6MTE|1|9|G|626
6MTE|1|9|U|627
6MTE|1|9|A|628
6MTE|1|9|A|629
6MTE|1|9|U|630
6MTE|1|9|U|631
6MTE|1|9|C|632
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain DD
- uS3
- Chain XX
- uS12
- Chain ee
- eS30
- Chain v
- eEF2
- Chain w
- SERBP1
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