IL_6N1D_026
3D structure
- PDB id
- 6N1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric Hybrid State
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- UGAAAGAC*GGGGAG
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6N1D_026 not in the Motif Atlas
- Homologous match to IL_4LFB_026
- Geometric discrepancy: 0.2059
- The information below is about IL_4LFB_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.3
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
6N1D|1|A16S|U|605
6N1D|1|A16S|G|606
6N1D|1|A16S|A|607
6N1D|1|A16S|A|608
6N1D|1|A16S|A|609
6N1D|1|A16S|G|610
6N1D|1|A16S|A|611
6N1D|1|A16S|C|612
*
6N1D|1|A16S|G|628
6N1D|1|A16S|G|629
6N1D|1|A16S|G|630
6N1D|1|A16S|G|631
6N1D|1|A16S|A|632
6N1D|1|A16S|G|633
Current chains
- Chain A16S
- 16S rRNA
Nearby chains
- Chain AS04
- 30S ribosomal protein S4
- Chain AS08
- 30S ribosomal protein S8
- Chain AS16
- 30S ribosomal protein S16
Coloring options: