IL_6N1D_263
3D structure
- PDB id
- 6N1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- X-ray Crystal complex showing Spontaneous Ribosomal Translocation of mRNA and tRNAs into a Chimeric Hybrid State
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GG*UAC
- Length
- 5 nucleotides
- Bulged bases
- 6N1D|1|B23S|A|896
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6N1D_263 not in the Motif Atlas
- Homologous match to IL_5J7L_275
- Geometric discrepancy: 0.3612
- The information below is about IL_5J7L_275
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_29366.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 266
Unit IDs
6N1D|1|B23S|G|880
6N1D|1|B23S|G|881
*
6N1D|1|B23S|U|895
6N1D|1|B23S|A|896
6N1D|1|B23S|C|897
Current chains
- Chain B23S
- 23S rRNA
Nearby chains
- Chain BL16
- 50S ribosomal protein L16
- Chain BL25
- 50S ribosomal protein L25
Coloring options: