IL_6NU2_087

3D structure

PDB id

6NU2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into unique features of the human mitochondrial ribosome recycling

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GCCC*GUAAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NU2_087 not in the Motif Atlas

Geometric match to IL_4V88_464

Geometric discrepancy: 0.2378

The information below is about IL_4V88_464

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_65718.1

Basepair signature

cWW-cSH-cWS-cWW-cWW

Number of instances in this motif group

5

Unit IDs

6NU2|1|AA|G|1485
6NU2|1|AA|C|1486
6NU2|1|AA|C|1487
6NU2|1|AA|C|1488
*
6NU2|1|AA|G|1562
6NU2|1|AA|U|1563
6NU2|1|AA|A|1564
6NU2|1|AA|A|1565
6NU2|1|AA|C|1566

Current chains

Chain AA

12S rRNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain A3

Aurora kinase A-interacting protein