3D structure

PDB id
6NU3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural insights into unique features of the human mitochondrial ribosome recycling
Experimental method
ELECTRON MICROSCOPY
Resolution
4.4 Å

Loop

Sequence
GAG*CUACC
Length
8 nucleotides
Bulged bases
6NU3|1|A|A|1986, 6NU3|1|A|U|1998, 6NU3|1|A|A|1999, 6NU3|1|A|C|2000
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6NU3_013 not in the Motif Atlas
Geometric match to IL_7A0S_021
Geometric discrepancy: 0.0895
The information below is about IL_7A0S_021
Detailed Annotation
Multiple bulged bases
Broad Annotation
No text annotation
Motif group
IL_89509.1
Basepair signature
cWW-cWW
Number of instances in this motif group
9

Unit IDs

6NU3|1|A|G|1985
6NU3|1|A|A|1986
6NU3|1|A|G|1987
*
6NU3|1|A|C|1997
6NU3|1|A|U|1998
6NU3|1|A|A|1999
6NU3|1|A|C|2000
6NU3|1|A|C|2001

Current chains

Chain A
16S rRNA

Nearby chains

Chain 2
39S ribosomal protein L34, mitochondrial
Chain D
39S ribosomal protein L2, mitochondrial
Chain F
39S ribosomal protein L4, mitochondrial
Chain T
39S ribosomal protein L22, mitochondrial
Chain X
39S ribosomal protein L28, mitochondrial

Coloring options:


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