3D structure

PDB id
6NU3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural insights into unique features of the human mitochondrial ribosome recycling
Experimental method
ELECTRON MICROSCOPY
Resolution
4.4 Å

Loop

Sequence
GUAAA*UGAAC
Length
10 nucleotides
Bulged bases
6NU3|1|A|A|2251
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6NU3_020 not in the Motif Atlas
Homologous match to IL_7A0S_033
Geometric discrepancy: 0.1919
The information below is about IL_7A0S_033
Detailed Annotation
UAA/GAN
Broad Annotation
No text annotation
Motif group
IL_08938.1
Basepair signature
cWW-tWH-L-tHS-cWW
Number of instances in this motif group
22

Unit IDs

6NU3|1|A|G|2149
6NU3|1|A|U|2150
6NU3|1|A|A|2151
6NU3|1|A|A|2152
6NU3|1|A|A|2153
*
6NU3|1|A|U|2248
6NU3|1|A|G|2249
6NU3|1|A|A|2250
6NU3|1|A|A|2251
6NU3|1|A|C|2252

Current chains

Chain A
16S rRNA

Nearby chains

Chain I
39S ribosomal protein L10, mitochondrial
Chain R
39S ribosomal protein L20, mitochondrial
Chain S
39S ribosomal protein L21, mitochondrial
Chain Z
39S ribosomal protein L30, mitochondrial
Chain j
39S ribosomal protein L52, mitochondrial
Chain o
Ribosomal protein 63, mitochondrial

Coloring options:


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