IL_6NU3_033

3D structure

PDB id

6NU3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into unique features of the human mitochondrial ribosome recycling

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

CCAG*CG

Length

6 nucleotides

Bulged bases

6NU3|1|A|C|2549

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NU3_033 not in the Motif Atlas

Homologous match to IL_5J7L_314

Geometric discrepancy: 0.2835

The information below is about IL_5J7L_314

Detailed Annotation

Minor groove platform, major groove intercalation

Broad Annotation

Minor groove platform, major groove intercalation

Motif group

IL_95583.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

11

Unit IDs

6NU3|1|A|C|2548
6NU3|1|A|C|2549
6NU3|1|A|A|2550
6NU3|1|A|G|2551
*
6NU3|1|A|C|2566
6NU3|1|A|G|2567

Current chains

Chain A

16S rRNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain D

39S ribosomal protein L2, mitochondrial