IL_6NU3_071

3D structure

PDB id

6NU3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural insights into unique features of the human mitochondrial ribosome recycling

Experimental method

ELECTRON MICROSCOPY

Resolution

4.4 Å

Loop

Sequence

GUGCCAG*CGGUCACAC

Length

16 nucleotides

Bulged bases

6NU3|1|AA|G|902, 6NU3|1|AA|C|904, 6NU3|1|AA|C|906, 6NU3|1|AA|A|907

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NU3_071 not in the Motif Atlas

Homologous match to IL_6CZR_133

Geometric discrepancy: 0.5217

The information below is about IL_6CZR_133

Detailed Annotation

Kink-turn related

Broad Annotation

No text annotation

Motif group

IL_54177.3

Basepair signature

cWW-cSW-tWH-L-R-L-R-tHS-cWW

Number of instances in this motif group

5

Unit IDs

6NU3|1|AA|G|887
6NU3|1|AA|U|888
6NU3|1|AA|G|889
6NU3|1|AA|C|890
6NU3|1|AA|C|891
6NU3|1|AA|A|892
6NU3|1|AA|G|893
*
6NU3|1|AA|C|900
6NU3|1|AA|G|901
6NU3|1|AA|G|902
6NU3|1|AA|U|903
6NU3|1|AA|C|904
6NU3|1|AA|A|905
6NU3|1|AA|C|906
6NU3|1|AA|A|907
6NU3|1|AA|C|908

Current chains

Chain AA

12S rRNA

Nearby chains

Chain AD

28S ribosomal protein S5, mitochondrial

Chain AJ

28S ribosomal protein S12, mitochondrial

Chain AZ

28S ribosomal protein S33, mitochondrial