3D structure

PDB id
6NU3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural insights into unique features of the human mitochondrial ribosome recycling
Experimental method
ELECTRON MICROSCOPY
Resolution
4.4 Å

Loop

Sequence
AUAUAC*GUGU
Length
10 nucleotides
Bulged bases
6NU3|1|AA|U|1259
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6NU3_088 not in the Motif Atlas
Homologous match to IL_5J7L_362
Geometric discrepancy: 0.5734
The information below is about IL_5J7L_362
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_49612.1
Basepair signature
cWW-L-R-L-R-L-cWW-L
Number of instances in this motif group
2

Unit IDs

6NU3|1|AA|A|1256
6NU3|1|AA|U|1257
6NU3|1|AA|A|1258
6NU3|1|AA|U|1259
6NU3|1|AA|A|1260
6NU3|1|AA|C|1261
*
6NU3|1|AA|G|1334
6NU3|1|AA|U|1335
6NU3|1|AA|G|1336
6NU3|1|AA|U|1337

Current chains

Chain AA
12S rRNA

Nearby chains

Chain AC
28S ribosomal protein S24, mitochondrial
Chain AD
28S ribosomal protein S5, mitochondrial
Chain AK
28S ribosomal protein S14, mitochondrial
Chain AZ
28S ribosomal protein S33, mitochondrial

Coloring options:


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