3D structure

PDB id
6NU3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structural insights into unique features of the human mitochondrial ribosome recycling
Experimental method
ELECTRON MICROSCOPY
Resolution
4.4 Å

Loop

Sequence
CG*UCAAG
Length
7 nucleotides
Bulged bases
6NU3|1|AA|C|1330, 6NU3|1|AA|A|1331
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6NU3_118 not in the Motif Atlas
Homologous match to IL_5J7L_048
Geometric discrepancy: 0.4808
The information below is about IL_5J7L_048
Detailed Annotation
Minor groove platform
Broad Annotation
No text annotation
Motif group
IL_95583.2
Basepair signature
cWW-L-cWW
Number of instances in this motif group
11

Unit IDs

6NU3|1|AA|C|1262
6NU3|1|AA|G|1263
*
6NU3|1|AA|U|1329
6NU3|1|AA|C|1330
6NU3|1|AA|A|1331
6NU3|1|AA|A|1332
6NU3|1|AA|G|1333

Current chains

Chain AA
12S rRNA

Nearby chains

Chain AC
28S ribosomal protein S24, mitochondrial
Chain AD
28S ribosomal protein S5, mitochondrial
Chain AH
28S ribosomal protein S10, mitochondrial
Chain AK
28S ribosomal protein S14, mitochondrial

Coloring options:


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