IL_6NUO_059

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGGGAG*CAG

Length

9 nucleotides

Bulged bases

6NUO|1|QA|G|1443

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NUO_059 not in the Motif Atlas

Homologous match to IL_4LFB_064

Geometric discrepancy: 0.4142

The information below is about IL_4LFB_064

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49061.1

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

6

Unit IDs

6NUO|1|QA|C|1440
6NUO|1|QA|G|1441
6NUO|1|QA|G|1442
6NUO|1|QA|G|1443
6NUO|1|QA|A|1446
6NUO|1|QA|G|1447
*
6NUO|1|QA|C|1459
6NUO|1|QA|A|1460
6NUO|1|QA|G|1461

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QT

30S ribosomal protein S20

Chain RA

Large subunit ribosomal RNA; LSU rRNA

Chain RT

50S ribosomal protein L19