IL_6NUO_121

3D structure

PDB id

6NUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GGAAG*UGACAAC

Length

12 nucleotides

Bulged bases

6NUO|1|RA|C|1590

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6NUO_121 not in the Motif Atlas

Homologous match to IL_7RQB_063

Geometric discrepancy: 0.2518

The information below is about IL_7RQB_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_02656.1

Basepair signature

cWW-L-R-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

6NUO|1|RA|G|1572
6NUO|1|RA|G|1573
6NUO|1|RA|A|1574
6NUO|1|RA|A|1575
6NUO|1|RA|G|1576
*
6NUO|1|RA|U|1587
6NUO|1|RA|G|1588
6NUO|1|RA|A|1589
6NUO|1|RA|C|1590
6NUO|1|RA|A|1591
6NUO|1|RA|A|1592
6NUO|1|RA|C|1593

Current chains

Chain RA

23S rRNA

Nearby chains